BioUML - open source Java framework for systems biology

 
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BioUML workbench version 0.8.0

This is a brief overview of new features that we introduced in this version:

  • Loading of modules from BioUML server

  • EBI data pack (Ensembl, UniProt, ChEBI, IntAct, BioModels) - free databases from EBI as BioUML modules
  • Composite database module
  • Database module editor
  • XML diagram type
  • SBML extensions for BioModels database (experiment, simulation, parameters, result, plot)
  • Experiments
Flash movies about new features:
     
BioUML tutorial
October 10, 8.30-12.30 a.m - tutorial "BioUML - integrated platform for building virtual cell and virtual physiological human" on ICSB 2010 conference.
 
Development roadmap was updated
It outlines of the future releases that the BioUML project hopes to accomplish. More...
 
SBML tests passed 100%
BioUML version 0.9.0 have passed all tests from SBML test suite version 2.0 (SBML L1v2, L2v1-4, L3v1) Test details.
 
Demo - flash movies
We have created 7 flash movies that demonstrate main BioUML features. Movies
 
BioUML forum
The forum aims to co-ordinate a community effort towards of development of BioUML and its application for modelling of biological systems. Here you can ask your questions as well as post your comments and suggestions. More...
 


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